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scientific publications microvisioneer manual slide scanning

SCIENTIFIC
PUBLICATIONS

Microvisioneer's manual slide scanning solutions are used by scientists all over the world.

Have a look at the list of selected scientific publications to get an impression of the versatile applications of Microvisioneer whole slide imaging and slide sharing solutions.

Targeting neuropilin-1 and neutralizing interleukin-6 inhibits cancer stem cell formation in bladder cancer cells

HW Weng, HK Ting, HH Wang, TJ Peng, SJ Tang, KH Sun

Research Square Preprint: https://doi.org/10.21203/rs.3.rs-8052232/v1  

Gyroid-Structured Scaffolds Guide Uniform Ossification and Modulate Vascular Morphology During Rat Calvarial Bone Defect Regeneration

G Xian, B Charbonnier, M Bensidhoum, E Potier, M Margottin et al.

Journal of Biomedical Materials Research Part A, 2025

https://doi.org/10.1002/jbm.a.37978

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Early micro and nanoscopic responses of microglia to blood-brain barrier modulation by transcranial-focused ultrasound

E Goncalves de Andrade, J VanderZwaag, R Hahn Kofoed, M Carrier, K Picard et al.

bioRxiv Preprint: https://doi.org/10.1101/2025.09.17.675183 

PD-1+ NK cell subsets in high grade serous ovarian cancer: an indicator of disease severity and a target for combined immune-checkpoint blockade

M Greppi, G Tabellini, O Patrizi, V Obino, M Bozzo et al.

Journal of Experimental & Clinical Cancer Research, 2025

https://doi.org/10.1186/s13046-025-03508-2

Genetic Deletion of the Purinergic Receptor P2rx7 Worsens the Phenotype of α-Sarcoglycan Muscular Dystrophy

C Astigiano, E Principi, S Pintus, A Benzi, S Baratto, et al.

ACS Pharmacology & Translational Science, 2025

https://doi.org/10.1021/acsptsci.5c00138

Lipid mediated formation of antiparallel aggregates in cerebral amyloid angiopathy

A Pacheco de Oliveira, D Baghel, B Holcombe, W Chase, et al.

Acta Neuropathologica, 2025

https://doi.org/10.1007/s00401-025-02911-5

γδ T cell distribution in the adventitial layer of noin-fertile cystic echinococcosis cysts from cattle livers

C Stoore, MS Baquedano, C Hidalgo, C Cabello-Verrugio, R Paredes

Scientific Reports, 2025

https://doi.org/10.1038/s41598-025-95690-8

Quantification of Protein Secondary Structures from Discrete Frequency Infrared Images using Machine Learning

H Edmonds, SS Mukherjee, B Holcombe, K Yeh, R Bhargava, A Ghosh

Applied Spectroscopy, 2025

https://doi.org/10.1177/00037028251325553

Aryl Hydrocarbon Receptor Deficinecy Upregulates Intercellular Adhesion Molecule 1 in Retinal Pigment Epithelial Cells and Contributes to Retinal Inflammation

T-M Yang, T-C Fang, Y-C Lee, C-C Lee, et al.

Laboratory Investigation, 2025

https://doi.org/10.1016/j.labinv.2025.104197

​Morphological and autofluorescence assessment of oocysts differentiate live from dead coccidian parasites

MJ Valente, H Streett, R Turner, C O'Brien, et al.

International Journal for Parasitology, 2025

https://doi.org/10.1016/j.ijpara.2025.04.003

Exploring iron deposition patterns using light and electron microscopy in the mouse brain across aging and Alzheimer's disease pathology conditions

V Lau, J VanderZwaag, C Murray, ME Tremblay

Journal of Neurochemistry, 2025

https://doi.org/10.1111/jnc.70086

Automated detection of Filamentous Fungal Keratitis on Whole Slide Images of Potassium Hydroxide Smears with Multiple Instance Learning

JF Assaf, H Yazbeck, PN Venkatesh, L Prajna, R Gunasekaran, K Rajarathinam, TM Lietman, JD Keenan, JP Campbell, X Song, TK Redd

Ophthalmology Science, 2025

https://www.sciencedirect.com/science/article/pii/S2666914524001891

Porphyromonas gingivalis GroEL accelerates abdominal aortic aneurysm formation by matrix metalloproteinase-2 SUMOylation in vascular smooth muscle cells: A novel finding for the activation of MMP-2

Y-W Lin, F-Y Lin, Z-H Lai, C-S Tsai, Y-T Tsai, Y-S Huang, C-W Liu

Molecular Oral Microbiology, 2024

https://doi.org/10.1111/omi.12487

Small Shelly Fauna Biodiversity from Reef-Adjacent Facies of the Upper Harkless Formation, Nevada

CC Bennett, C Mate, S Jacquet

Available at SSRN, 2024: https://dx.doi.org/10.2139/ssrn.5012444

Development of an Oral Epithelial Ex Vivo Organ Culture Model for Biocompatibility and Permeability Assessment of Biomaterials

F Machla, C Bekiari, P Kyriaki Monou, E Kofidou et al.

Bioengineering, 2024

https://doi.org/10.3390/bioengineering11101035

Control of Dopamine Signal in High-Order Receptor Complex on Striatal Astrocytes

S Amato, M Averna, E Farsetti, D Guidolin, M Pedrazzi et al.

International Journal of Molecular Sciences, 2024

https://doi.org/10.3390/ijms25168610

The olfactory system of sharks and rays in numbers

S Aicardi, M Bozzo, J Guallart, F Garibaldi, L Lanteri, E Terzibasi, S Bagnoli et al.

The Anatomical Record, 2024

https://doi.org/10.1002/ar.25537

Rotenone-Induced Optic Nerve Damage and Retinal Ganglion Cell Loss in Rats

Y Yamamoto, T Taniguchi, A Shimazaki

Biomolecules, 2024

https://doi.org/10.3390/biom14091047 

CILP-2 expression in the intervertebral discs of patients with lumbar radiculopathy

K Koiv, M Aunapuu, T Torga, T Rätsep, K Bakhoff, A Arend

BMC Musculoskeletal Disorders, 2024

https://doi.org/10.1186/s12891-024-07996-9

Investigation of Ki67 and Phospho-Histone H3 Expression in Urothelial Carcinoma of the Bladder by Immunohistochemical Method

RO Yüceer and S Baspinar

Cureus, 2024

https://doi.org/10.7759/cureus.55297

Long-term recruitment of peripheral immune cells to brain scars after a neonatal insult

L Bolini, RM Pereira Campos, D Aparecida Spiess, FL Lima-Rosa, D Pereira Dantas, L Conde, R Mendez-Otero, AM Vale, P Moreno Pimentel-Coelho

Glia, 2024

https://doi.org/10.1002/glia.24490

Local variation in stress response of juvenile anadromous brown trout, Salmo trutta

M Berry, LA Zena, JAC Roques, E Sandblom, EB Thorstad, J Höjesjö

Ecology and Evolution, 2024

https://doi.org/10.1002/ece3.11526

The effect of Vortioxetine on the NLRP3 pathway and microglial activity in the prefrontal cortex in an experimental model of depression

G Ozdamar Unal, D Kumbul, K Hekimler Ozturk, G Erkilin, F Donmez, E Dogan Kiran, R Oguz Yuceer

Immunopharmacology and Immunotoxicology, 2024

https://doi.org/10.1080/08923973.2024.2308268

Searching for traces of human activity in earthen floor sequences: high-resolution geoarchaeological analyses at an Early Iron Age village in Central Iberia

L Tomé, E Iriarte, A Blanco-González, M Jambrina-Enríquez, N Éguez, A V. Herrera-Herrera, C Mallol

Journal of Archaeological Science, 2024

https://doi.org/10.1016/j.jas.2023.105897

Comprehensive Chemical Profiling and Mechanistic Insight into Anticancer Activity of Annona muricata Leaves Extract

RH Abdallah, AR Al-Attar, YM Shehata, DM Abdel-Fattah et al.

Pharmaceuticals, 2024

https://doi.org/10.3390/ph17050614

The Combined Therapy of Teriparatide and Raloxifene Improves Osseointegration of Dental Implants in the Osteoporotic Rabbit Model

AE Demirbas, F Mohsen, C Topan, M Karakaya, N Kütük, A Alkan

International Journal of Oral and Maxillofacial Implants, 2024

https://doi.org/10.11607/jomi.10040

Not seen before. Unveiling depositional context and Mammuthus meridionalis exploitation at Fuente Nueva 3 (Orce, southern Iberia) through taphonomy and microstratigraphy

J Yravedra, LA Courtenay, M Gutiérrez-Rodríguez, JF Rodríguez-Alba, JA Solano et al.

Quaternary Science Reviews, 2024

https://doi.org/10.1016/j.quascirev.2024.108561

The antidepressant fluoxetine (Prozac®) modulates serotonin signaling to alter maternal peripartum calcium homeostasis

RR Domingues, NN Teixeira, WS Frizzarini, AD Beard, MK Connelly, A Vang, MC Wiltbank, LL Hernandez

Scientific Reports, 2023

https://doi.org/10.1038/s41598-023-49253-4

StAR-related lipid transfer domain protein 3 (STARD3) regulates HER2 and promotes HER2-positive breast cancer progression through interaction with HSP90 and SRC signaling

DHN Binh, T-C Cheng, S-H Tu, Y-C Liao, Y-Y Yang, L-C Chen, Y-S Hu

American Journal of Cancer Research, 2023

PMCID: PMC10695785

Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics

G Lozachmeur, A Bramoulle, A Aubert, F Stüder, J Moehlin, L Madrange, F Yates, J-P Deslys, MA Mendoza-Parra

Cell Reports Methods, 2023

https://doi.org/10.1016/j.crmeth.2023.100573

Intermediate Antiparallel β Structure in Amyloid β Plaques Revealed by Infrared Spectroscopic Imaging

B Holcombe, A Foes, S Banerjee, K Yeh, S-H J Wang, R Bhargava, A Ghosh

ACS Chemical Neuroscience, 2023

https://doi.org/10.1021/acschemneuro.3c00400

Multiple Responses of Mytilus galloprovincialis to plastic microfibers

M Auguste, M Leonessi, M Bozzo, B Risso, L Cutroneo, S Prandi, A Jemec Kokalj, D Drobne, L Canesi

Science of The Total Environment, 2023

https://doi.org/10.1016/j.scitotenv.2023.164318

Garcinol acts as a novel integrin αIIbβ3 inhibitor in human platelets

C-W Hsia, W-C Huang, T Jayakumar, H-H Hsia, S-M Hou, C-C Chang, T-L Yen, J-R Sheu

Life Sciences, 2023

https://doi.org/10.1016/j.lfs.2023.121791

Dietary replacement of fishmeal with marine proteins recovered from shrimp and herring process waters promising in Atlantic salmon aquaculture

I Hedén, B Forghani Targhi, G Baardsen, B Westereng, T Svendsen, E Jönsson, L Hasselberg Frank, I Undeland, K Sundell, H Sundh

Aquaculture, 2023

https://doi.org/10.1016/j.aquaculture.2023.739735

Computational Pathology: A Survey Review and The Way Forward

MS Hosseini, BE Bejnordi, VQ-H Trinh, L Chan, D Hasan et al.

Journal of Pathology Informatics, 2024

https://doi.org/10.1016/j.jpi.2023.100357

Aging-Associated Thyroid Dysfunction Contributes to Oxidative Stress and Worsened Functional Outcomes Following Traumatic Brain Injury

C-T Hsieh, T-L Yen, Y-H Chen, J-S Jan, R-D Teng, C-H Yang, J-M Sun

Antioxidants, 2023

https://doi.org/10.3390/antiox12020217

The Urban Biography of a Mauritanian City: Microstratigraphic Analysis of the Eastern Quarter of Tamuda (Morocco)

M Gutiérrez-Rodríguez, D Bernal-Casasola, JJ Díaz-Rodríguez, JM Vargas Girón, T Moujoud

African Archaeological Review, 2022

https://doi.org/10.1007/s10437-022-09506-5

The Nomadic Digital Pathologist. Validation of a simple, dual slide scanner with remote reporting for a regional upper gastrointestinal specialist multidisciplinary meeting

T Bracey

Journal of Pathology Informatics, 2022

https://doi.org/10.1016/j.jpi.2022.100161

Towards Highly Expressive Machine Learning Models of Non-Melanoma Skin Cancer

SM Thomas, JG Lefevre, G Baxter, NA Hamilton 

arXiv preprint: arXiv:2207.05749

Seasonal reproductive allocation in landlocked Alewife Alosa pseudoharengus, in the context of niche construction and eco‐evolutionary feedbacks

FA Mouchlianitis, ET Schultz, K Ganias

Ecology of Freshwater Fish, 2022

https://doi.org/10.1111/eff.12663

A New Artificial Intelligence-Based Method for Identifying Mycobacterium Tuberculosis in Ziehl–Neelsen Stain on Tissue

S ZuracC Mogodici, T Poncu, M Trăscău, C Popp et al.

Diagnostics (12), 2022

https://doi.org/10.3390/diagnostics12061484

Adrenal glands of mice and rats: A comparative morphometric study

A Siasios, G Delis, A Tsingotjidou, A Pourlis, I Grivas

Laboratory Animals (569), 2022

https://doi.org/10.1177/00236772211044352

Microstratigraphic analysis of the main Roman road in Hispania: the Via Augusta where it passes through the Ianus Augustus (Mengíbar, Spain)

M Gutiérrez-RodríguezMÁ Lechuga Chica, MI Moreno Padilla, JP Bellón Ruiz

Archaeological and Anthropological Sciences (14), 2022

https://doi.org/10.1007/s12520-022-01602-6

Patient with prostatic adenocarcinoma with plasmacytoid features and an aberrant immunohistochemical phenotype diagnosed by biopsy and a mini‑review of plasmacytoid features in the genitourinary system: A case report

K Zacharouli, DP Vageli, GK Koukoulis, M Ioannou

Molecular and Clinical Oncology (16), 2022

https://doi.org/10.3892/mco.2022.2500

A rare and complete response to combination therapy with radiation and nivolumab in a patient with metastatic urothelial cancer

A Hietala, J Joutsen, S Vaarala, M Säily

BMJ Case Reports (15), 2022

http://dx.doi.org/10.1136/bcr-2021-246653

The Arrangement of the Peripheral Olfactory System of Pleuragramma antarcticum: A Well-Exploited Small Sensor, an Aided Water Flow, and a Prominent Effort in Primary Signal Elaboration

S Aicardi, M Bozzo, A Amaroli, L Gallus et al.

Animals (12), 2022

https://doi.org/10.3390/ani12050663

The effects of hesperidin on stricture formation in corrosive esophageal burns: an experimental study

M Anayurt, A Karaman, Ö Balcı, IF Özgüner et al.

Esophagus (19), 2022

https://doi.org/10.1007/s10388-021-00861-x

Transmembrane protein 119 is neither a specific nor a reliable marker for microglia

E Vankriekelsvenne, U Chrzanowski, K Manzhula, T Greiner et al.

Glia (70), 2022

https://doi.org/10.1002/glia.24164

Heterodimer of A2A and Oxytocin Receptors Regulating Glutamate Release in Adult Striatal Astrocytes

S Amato, M Averna, D Guidolin, M Pedrazzi et al.

International Journal of Molecular Sciences (23), 2022

https://doi.org/10.3390/ijms23042326

Lack of Tgfbr1 and Acvr1b synergistically stimulates myofibre hypertrophy and accelerates muscle regeneration

MMG Hillege, A Shi, RA Galli, G Wu et al.

eLife (11), 2022

https://doi.org/10.7554/eLife.77610

Digestive and immune functions in the intestine of wild Ballan wrasse (Labrus bergylta)

W Zhou, Å Krogdahl, Ø Sæle, E Chikwati et al.

Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology (260), 2021

https://doi.org/10.1016/j.cbpa.2021.111011

Using clustering algorithms for identification of fish oocyte cohorts based on the characteristics of cytoplasmic structures

K Charitonidou, K Ganias

Theriogenology (170), 2021

https://doi.org/10.1016/j.theriogenology.2021.04.017

Fecundity pattern and spawning dynamics of the common cuttlefish Sepia officinalis

K Ganias, IF Kompogianni

Marine Biology Research (17), 2021

https://doi.org/10.1080/17451000.2022.2032176

Radiotherapy and High-Dose Interleukin-2: Clinical and Immunological Results of a Proof of Principle Study in Metastatic Melanoma and Renal Cell Carcinoma

J Bulgarelli, C Piccinini, E Petracci, E Pancisi et al.

Frontiers in Immunology (12), 2021

doi: 10.3389/fimmu.2021.778459

It takes time to heal a broken heart: ventricular plasticity improves heart performance after myocardial infarction in rainbow trout, Oncorhynchus mykiss

LA Zena, A Ekström, A Gräns, C Olsson et al.

Journal of Experimental Biology (224), 2021

https://doi.org/10.1242/jeb.243578

Cuprizone-induced demyelination triggers a CD8-pronounced T cell recruitment

H Kaddatz, S Joost, J Nedelcu, U Chrzanowski et al. 

Glia (69), 2021

https://doi.org/10.1002/glia.23937

Recurrence in Oral Premalignancy: Clinicopathologic and Immunohistochemical Analysis

M Georgaki, D Avgoustidis, VI Theofilou, E Piperi et al.

Diagnostics (11), 2021

https://doi.org/10.3390/diagnostics11050872

The Regulation of Non-Specific Membrane Permeability Transition in Yeast Mitochondria under Oxidative Stress

EP Isakova, OI Klein, YI Deryabina

Microbiology Research (12), 2021

https://doi.org/10.3390/microbiolres12020029

Novel approach for quantification of multiple immunofluorescent signals using histograms and 2D plot profiling of whole-section panoramic images

R Duplancic, D Kero

Scientific Reports (11), 2021

https://doi.org/10.1038/s41598-021-88101-1

The lytic polysaccharide monooxygenase CbpD promotes Pseudomonas aeruginosa virulence in systemic infection

F Askarian, S Uchiyama, H Masson, HV Sørensen et al.

Nature Communications (12), 2021

https://doi.org/10.1038/s41467-021-21473-0

Synergistic dispersal of plant pathogen spores by jumping-droplet condensation and wind

R Mukherjee, HA Gruszewski, LT Bilyeu, DG Schmale III, JB Boreyko

PNAS (118), 2021

https://doi.org/10.1073/pnas.21069381

Lipid Remodeling in the Mitochondria upon Ageing during the Long-Lasting Cultivation of Endomyces magnusii

EP Isakova, NN Gessler, DI Dergacheva, VM Tereshina et al.

Applied Sciences (11), 2021

https://doi.org/10.3390/app11094069

Phospholipase D1 and D2 synergistically regulate thrombus formation

LM Lien, WJ Lu, TY Chen, TY Lee et al.

International Journal of Molecular Sciences (21), 2020

https://doi.org/10.3390/ijms21186954

The formyl peptide receptor agonist Ac2-26 alleviates neuroinflammation in a mouse model of pneumococcal meningitis

M Rüger, E Kipp, N Schubert, N Schröder et al.

Journal of Neuroinflammation (17), 2020

https://doi.org/10.1186/s12974-020-02006-w

Cyberlindnera jadinii yeast as a protein source for broiler chickens: effects on growth performance and digestive function from hatching to 30 days of age

A Cruz, H Sterten, FS Steinhoff, LT Mydland, M Øverland

Poultry Science (99), 2020

https://doi.org/10.1016/j.psj.2020.01.023

Timing of oocyte recruitment within the ovulatory cycle of Macedonian shad, Alosa macedonica, a batch spawning fish with indeterminate fecundity

FA Mouchlianitis, G MinosK Ganias

Theriogenology (146), 2020

https://doi.org/10.1016/j.theriogenology.2020.01.050

Prefrontal cortex inflammation and liver pathologies accompany cognitive and motor deficits following Western diet consumption in non-obese female mice

E Veniaminova, M Oplatchikova, L Bettendorff, E Kotenkova et al.

Life Sciences (241), 2020

https://doi.org/10.1016/j.lfs.2019.117163

Silver (I) complexes with different pyridine-4, 5-dicarboxylate ligands as efficient agents for the control of cow mastitis associated pathogens

TP Andrejević, D MilivojevicBĐ GlišićJ Kljun

Dalton Transactions (49), 2020

https://doi.org/10.1039/D0DT00518E

Dendritic Cell Vaccination in Metastatic Melanoma Turns “Non-T Cell Inflamed” Into “T-Cell Inflamed” Tumors

J Bulgarelli, M Tazzari, AM Granato, L Ridolfi et al.

Frontiers in Immunology (10), 2019

https://doi.org/10.3389/fimmu.2019.02353

Powering the hagfish “bite”: The functional morphology of the retractor complex of two hagfish feeding apparatuses

BL Clubb, AJ Clark, TA Uyeno

Journal of Morphology (280), 2019

https://doi.org/10.1002/jmor.20986

Laquinimod supports remyelination in non-supportive environments

S Nyamoya, J Steinle, U Chrzanowski, J Kaye et al.

Cells (8), 2019

https://doi.org/10.3390/cells8111363

G-protein-coupled receptor Gpr17 expression in two multiple sclerosis remyelination models

S Nyamoya, P Leopold, B Becker, C Beyer et al.

Molecular Neurobiology (56), 2019

https://doi.org/10.1007/s12035-018-1146-1

Vertical ridge augmentation using guided bone regeneration procedure and dental pulp derived mesenchymal stem cells with simultaneous dental implant placement: A histologic study in a sheep model

HA Çolpak, ZB Gönen, S Özdamar, A Alkan, N Kütük

Journal of Stomatology, Oral and Maxillofacial Surgery (120), 2019

https://doi.org/10.1016/j.jormas.2018.12.011

Syndecans and enzymes for heparan sulfate biosynthesis and modification differentially correlate with presence of inflammatory infiltrate in periodontitis

R Duplancic, M Roguljic, I Puhar, N Vecek et al.

Frontiers in Physiology (10), 2019

https://doi.org/10.3389/fphys.2019.01248

 

High-resolution dynamic illustrations in soil micromorphology: A proposal for presenting and sharing primary research data in publication

M Gutiérrez-RodríguezM Toscano, P Goldberg

Journal of Archaeological Science: Reports (20), 2018

https://doi.org/10.1016/j.jasrep.2018.05.025

 


 

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